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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82809755_82817983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82809755 - 82817983

Intron Length:

8229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TCCTCTTTGAAA

Flanking Amino Acid:

WNVAEPLFSPGIQESPVPNG

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

88.7

0.96

0.8

36.5

Major PPT

66.4

0.37

1.1

69.7

34.5

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

62.1

0.37

1.4

66.79

40.1

Associated Gene:

Gene:

PAX5

Ensembl Gene ID:

ENSAPLG00000010841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021034

82770779 - 82900005

129227

ENSAPLT00000035436

82770779 - 82892244

121466