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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82818160_82840622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82818160 - 82840622

Intron Length:

22463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTTC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TATTGGTAAAAT

Flanking Amino Acid:

TTTEPIKPEQATEYSAMASL

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

66.9

39.5

Major BPS

84.7

0.86

74.3

40.7

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

40.3

-1.1

3.5

45.8

Minor BPS

43.9

-0.3

2.6

70.09

46.4

Associated Gene:

Gene:

PAX5

Ensembl Gene ID:

ENSAPLG00000010841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035436

82770779 - 82892244

121466

ENSAPLT00000021034

82770779 - 82900005

129227

ENSAPLT00000011283

82770779 - 82900005

129227