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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82840753_82852474_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82840753 - 82852474

Intron Length:

11722

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

CCTACAACAATAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTACAA

U12 Branch Point Sequence:

TGTCCTACAACA

Flanking Amino Acid:

PGPQSYPIVTAKHPRLPVQY

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

49.4

-0

1.1

58.6

36.6

Major PPT

55.1

0.12

0.9

48.6

32.9

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

50.4

0.01

1.8

67.35

38.4

Associated Gene:

Gene:

PAX5

Ensembl Gene ID:

ENSAPLG00000010841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021034

82770779 - 82900005

129227