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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82840753_82868416_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82840753 - 82868416

Intron Length:

27664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTTGGTTTGATT

Flanking Amino Acid:

PGPQSYPIVTGRELASTTLP

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

80.6

33.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

79.8

0.67

0.8

77.5

36.5

Minor 5ss

-1.8

3.2

48.4

47.4

Minor BPS

50.5

0.09

1.9

70.84

41.1

Associated Gene:

Gene:

PAX5

Ensembl Gene ID:

ENSAPLG00000010841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035436

82770779 - 82892244

121466

ENSAPLT00000011283

82770779 - 82900005

129227