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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82892108_82899815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82892108 - 82899815

Intron Length:

7708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAC

U12 Branch Point Sequence:

GTCTTCTTCACA

Flanking Amino Acid:

SWRFPNPGLLGSPYYYSAAA

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.2

28.3

Major BPS

77.5

0.68

79.6

Major PPT

88.5

0.87

0.7

80.8

31.2

Minor 5ss

40.6

-1

2.8

49.4

41.4

Minor BPS

62.6

0.39

1.8

71.26

41.2

Associated Gene:

Gene:

PAX5

Ensembl Gene ID:

ENSAPLG00000010841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021034

82770779 - 82900005

129227

ENSAPLT00000011283

82770779 - 82900005

129227