Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82998368_82999733_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82998368 - 82999733

Intron Length:

1366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TGACTACTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTCTTGACT

Flanking Amino Acid:

STRDEPRKLKAHYNVTTTQL

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.5

0.46

0.9

67.1

39.2

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

81.1

1.06

1.1

90.53

33.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016624

82998200 - 83000539

2340