Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_8355430_8356308_R

Intron Information:

Intron Rank:

135920

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8355430 - 8356308

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAACTCTG

5'SS Class:

weak_major

3'SS Sequence:

CCCTGTCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CATATATTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.7

0.28

1.2

57.7

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

75.2

0.57

0.8

67.9

32.4

Minor 5ss

45.6

-0.5

2.9

64.5

40.7

Minor BPS

60.2

0.4

1.7

74.9

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025337

8351799 - 8356432

4634