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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_836838_837451_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

836838 - 837451

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGAGTACA

5'SS Class:

major

3'SS Sequence:

CTCCCCATCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTCCCCATCACA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

72.2

32.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

71.4

0.48

0.8

64.5

29.3

Minor 5ss

32.4

-2

2.6

36.4

34.8

Minor BPS

48.1

-0.1

2.1

61.46

44.5

Associated Gene:

Gene:

CNTFR

Ensembl Gene ID:

ENSAPLG00000005167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023341

836837 - 1012523

175687

ENSAPLT00000035309

836837 - 952117

115281

ENSAPLT00000017667

836837 - 947054

110218

ENSAPLT00000031071

836837 - 995707

158871

ENSAPLT00000005348

836837 - 947631

110795

ENSAPLT00000029149

836837 - 951951

115115

ENSAPLT00000005346

836837 - 1001683

164847

ENSAPLT00000026697

836837 - 994157

157321

ENSAPLT00000043787

836837 - 939268

102432