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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_837597_838645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

837597 - 838645

Intron Length:

1049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCACCAT

U12 Branch Point Sequence:

CTCCCCTCACCA

Flanking Amino Acid:

KHLTTEAQITETTSTSTSSF

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

72.5

37.3

Major BPS

0.08

1.4

42.7

Major PPT

74.5

0.55

0.7

68.2

25.5

Minor 5ss

33.2

-1.9

3.1

43.3

43.8

Minor BPS

49.1

-0

1.9

60.78

45.1

Associated Gene:

Gene:

CNTFR

Ensembl Gene ID:

ENSAPLG00000005167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017667

836837 - 947054

110218

ENSAPLT00000031071

836837 - 995707

158871

ENSAPLT00000005348

836837 - 947631

110795

ENSAPLT00000029149

836837 - 951951

115115

ENSAPLT00000005346

836837 - 1001683

164847

ENSAPLT00000026697

836837 - 994157

157321

ENSAPLT00000043787

836837 - 939268

102432

ENSAPLT00000023341

836837 - 1012523

175687

ENSAPLT00000035309

836837 - 952117

115281