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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_838827_848007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

838827 - 848007

Intron Length:

9181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CCGCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTGAT

U12 Branch Point Sequence:

ATCACCTTACCG

Flanking Amino Acid:

RPLILDQWQHVELSDGTSHT

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

1.2

81.4

32.7

Major BPS

76.2

0.65

39.8

Major PPT

64.4

0.33

0.9

57.2

33.4

Minor 5ss

35.7

-1.6

3.3

48.3

41.3

Minor BPS

58.3

0.12

1.8

62.4

45.3

Associated Gene:

Gene:

CNTFR

Ensembl Gene ID:

ENSAPLG00000005167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017667

836837 - 947054

110218

ENSAPLT00000031071

836837 - 995707

158871

ENSAPLT00000005348

836837 - 947631

110795

ENSAPLT00000029149

836837 - 951951

115115

ENSAPLT00000005346

836837 - 1001683

164847

ENSAPLT00000026697

836837 - 994157

157321

ENSAPLT00000043787

836837 - 939268

102432

ENSAPLT00000023341

836837 - 1012523

175687

ENSAPLT00000035309

836837 - 952117

115281