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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_855199_855984_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

855199 - 855984

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCTGCTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTTCTGTAGCT

Flanking Amino Acid:

YIPNSFNISVIHGTREMVCE

Intron Amino Acid Position:

183

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

33.2

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

77.4

0.62

0.8

37.6

Minor 5ss

36.4

-1.5

3.2

49.6

39.8

Minor BPS

0.24

2.2

80.47

41.6

Associated Gene:

Gene:

CNTFR

Ensembl Gene ID:

ENSAPLG00000005167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005346

836837 - 1001683

164847

ENSAPLT00000026697

836837 - 994157

157321

ENSAPLT00000043787

836837 - 939268

102432

ENSAPLT00000023341

836837 - 1012523

175687

ENSAPLT00000035309

836837 - 952117

115281

ENSAPLT00000017667

836837 - 947054

110218

ENSAPLT00000031071

836837 - 995707

158871

ENSAPLT00000005348

836837 - 947631

110795

ENSAPLT00000029149

836837 - 951951

115115