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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_8681523_8684059_F

Intron Information:

Intron Rank:

123722

Intron Class:

major

Intron Phase:

Intron Coordinates:

8681523 - 8684059

Intron Length:

2537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

CACTATTTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCATTTTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

83.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.6

0.64

0.9

71.7

37.6

Minor 5ss

45.5

-0.5

2.9

63.6

Minor BPS

61.5

0.44

1.6

75.56

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016716

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042380

8677464 - 8684583

7120