Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_908516_939092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

908516 - 939092

Intron Length:

30577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTCGT

5'SS Class:

major

3'SS Sequence:

CTTGCTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CAAACCCTGACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

1.3

72.7

44.5

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

77.9

0.63

0.8

72.1

32.6

Minor 5ss

31.4

-2.1

2.9

42.4

44.2

Minor BPS

51.3

0.12

1.8

66.78

43.4

Associated Gene:

Gene:

CNTFR

Ensembl Gene ID:

ENSAPLG00000005167

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043787

836837 - 939268

102432