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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9133677_9134292_F

Intron Information:

Intron Rank:

127509

Intron Class:

major

Intron Phase:

Intron Coordinates:

9133677 - 9134292

Intron Length:

616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

GTATATGTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

47.5

-0.2

2.1

60.68

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029305

9132266 - 9135196

2931

ENSAPLT00000030722

9132766 - 9134333

1568