Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9267454_9270472_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9267454 - 9270472

Intron Length:

3019

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCCTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ATTAAATAAATT

Flanking Amino Acid:

VVEQIHKFAQYWRK*

Intron Amino Acid Position:

883

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.8

76.8

33.7

Major BPS

73.5

0.58

79.3

29.4

Major PPT

82.4

0.73

0.7

77.6

24.3

Minor 5ss

27.4

-2.6

2.7

30.4

Minor BPS

46.8

-0.1

69.56

41.1

Associated Gene:

Gene:

PIK3C3

Ensembl Gene ID:

ENSAPLG00000012759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013314

9267439 - 9333582

66144

ENSAPLT00000013313

9267439 - 9333582

66144