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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9270599_9282975_R


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9270599 - 9282975

Intron Length:
12377

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACAGGA

5'SS Class:
major

3'SS Sequence:
CAACTCATTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AACTCAT

U12 Branch Point Sequence:
GTCTCCCCAACT

Flanking Amino Acid:
ALEPDKTVKKVQDKFRLDLS

Intron Amino Acid Position:
841

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1.2
66.1
40.1

Major BPS
78.3
0.7
0.8
77.7
26.1

Major PPT
69.2
0.43
1
58.9
41.2

Minor 5ss
35.3
-1.7
3.4
47.8
47.6

Minor BPS
58.1
0.33
1.9
78.17
43.6

Associated Gene:

Gene:
PIK3C3

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9267439 - 9333582
66144

9267439 - 9333582
66144