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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9273_9828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9273 - 9828

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TGGGCTCTGACA

Flanking Amino Acid:

RSPRFFIAAQGPLPGTVVDF

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

69.1

0.47

60.7

37.6

Major PPT

77.9

0.63

0.7

70.1

30.9

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

48.4

-0.1

1.8

59.4

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005719

2781 - 13437

10657