Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9317023_9317474_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9317023 - 9317474

Intron Length:

452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GTGTGTCTAATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTGTTTTAAACT

Flanking Amino Acid:

PNAATRDQLNIIVSYPPTKQ

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

74.4

36.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

64.1

0.32

58.9

41.9

Minor 5ss

36.9

-1.5

49.2

40.2

Minor BPS

0.42

1.7

75.57

41.7

Associated Gene:

Gene:

PIK3C3

Ensembl Gene ID:

ENSAPLG00000012759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013314

9267439 - 9333582

66144

ENSAPLT00000013313

9267439 - 9333582

66144