Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9318258_9318705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9318258 - 9318705

Intron Length:

448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

GTCTTTCATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TTGTCTTTCATG

Flanking Amino Acid:

VKIPDPQMSMTVPKYSSRKD

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

83.5

Major BPS

87.6

0.93

0.9

89.3

Major PPT

74.5

0.55

0.9

70.3

35.4

Minor 5ss

45.5

-0.5

2.9

63.6

Minor BPS

59.7

0.16

1.8

66.43

42.4

Associated Gene:

Gene:

PIK3C3

Ensembl Gene ID:

ENSAPLG00000012759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013314

9267439 - 9333582

66144