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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9326089_9328932_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9326089 - 9328932

Intron Length:
2844

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGTAGAA

5'SS Class:
major

3'SS Sequence:
GTTTTGTATGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATCAT

U12 Branch Point Sequence:
AACAATTTAAAT

Flanking Amino Acid:
SEDQMSRLAKLTKSHRQGHM

Intron Amino Acid Position:
178

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.1
64.1
36

Major BPS
88.2
0.95
0.9
88.3
28.5

Major PPT
79
0.65
1
73.7
40.9

Minor 5ss
28.4
-2.5
3.5
37.9
47

Minor BPS
49.3
0.02
1.6
62.82
40.7

Associated Gene:

Gene:
PIK3C3

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9267439 - 9333582
66144

9267439 - 9333582
66144