Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9329063_9331130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9329063 - 9331130

Intron Length:

2068

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAATAT

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTTGCTGAAGT

Flanking Amino Acid:

GTTVSLFGKYGMFRQGMHDL

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

35.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

93.6

0.98

0.6

89.1

19.8

Minor 5ss

38.5

-1.3

3.2

47.5

Minor BPS

54.6

0.22

2.2

79.25

42.7

Associated Gene:

Gene:

PIK3C3

Ensembl Gene ID:

ENSAPLG00000012759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013313

9267439 - 9333582

66144

ENSAPLT00000017678

9328092 - 9333582

5491

ENSAPLT00000013314

9267439 - 9333582

66144