Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9426466_9426561_F

Intron Information:

Intron Rank:

129743

Intron Class:

major

Intron Phase:

Intron Coordinates:

9426466 - 9426561

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACGTGC

5'SS Class:

major

3'SS Sequence:

CTCTGTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GTTAATTTCACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.2

60.9

40.9

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.77

0.8

75.9

Minor 5ss

37.2

-1.5

3.3

50.2

46.4

Minor BPS

51.2

0.12

74.46

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029735

9424966 - 9426709

1744

ENSAPLT00000019798

9418184 - 9426709

8526