Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_94870_96906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

94870 - 96906

Intron Length:

2037

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTTGGTATT

5'SS Class:

major

3'SS Sequence:

TTTTTCTGTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TTTTCTGTTAAG

Flanking Amino Acid:

IYEEIEKDLMLLGATAIEDK

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.2

75.6

39.9

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

77.5

0.62

1.1

83.4

Minor 5ss

36.8

-1.5

3.1

49.3

41.1

Minor BPS

-0.3

2.4

64.21

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002472

93540 - 123944

30405