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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9492958_9499049_F

Intron Information:

Intron Rank:

125266

Intron Class:

major

Intron Phase:

Intron Coordinates:

9492958 - 9499049

Intron Length:

6092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTACTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CCTTCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.2

81.4

33.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

86.4

0.82

0.8

80.7

30.9

Minor 5ss

38.3

-1.3

2.8

51.3

45.1

Minor BPS

0.49

1.6

74.81

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047233

9492682 - 9504846

12165