Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9638258_9650520_R

Intron Information:

Intron Rank:

141594

Intron Class:

major

Intron Phase:

Intron Coordinates:

9638258 - 9650520

Intron Length:

12263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CCATCTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTTTTTCCATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

73.3

37.4

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

70.9

0.47

74.7

33.7

Minor 5ss

34.6

-1.7

2.8

39.6

39.8

Minor BPS

50.2

-0

1.9

69.41

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048377

9637318 - 9650787

13470