Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9650623_9673357_R

Intron Information:

Intron Rank:

141593

Intron Class:

major

Intron Phase:

Intron Coordinates:

9650623 - 9673357

Intron Length:

22735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTACTG

5'SS Class:

major

3'SS Sequence:

CTCATTGTTATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTTCCTCCAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.8

0.47

1.1

59.4

45.2

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

73.6

0.53

0.9

67.9

37.6

Minor 5ss

34.6

-1.8

3.4

48.1

47.4

Minor BPS

59.9

0.39

2.1

85.81

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020387

9650575 - 9673382

22808