Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_97072_98487_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

97072 - 98487

Intron Length:

1416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CACTGTCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

TCTCCTTTGACT

Flanking Amino Acid:

LKEETTEHLNEFAGEGLRTL

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

87.3

Major BPS

74.1

0.6

66.7

39.9

Major PPT

71.4

0.48

0.9

64.8

36.1

Minor 5ss

41.1

-1

3.4

62.8

Minor BPS

74.6

0.86

1.2

84.49

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002395

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002472

93540 - 123944

30405