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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9835076_9836123_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9835076 - 9836123

Intron Length:
1048

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGAAAT

5'SS Class:
strong_major

3'SS Sequence:
TATCTGTCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAA

U12 Branch Point Sequence:
TCTTCTAAAACC

Flanking Amino Acid:
AQPSKKEKKKGPEKTDESLL

Intron Amino Acid Position:
33

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.9
1.03
0.7
89.8
22.3

Major BPS
85.3
0.88
0.8
84.2
21.8

Major PPT
78.9
0.65
0.9
69.8
41.2

Minor 5ss
35.1
-1.7
3.1
48.5
47.2

Minor BPS
55.2
0.14
2
70.7
41

Associated Gene:

Gene:
DAB2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9834898 - 9845414
10517

9834898 - 9845414
10517