Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9836264_9836972_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9836264 - 9836972

Intron Length:

709

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

AATGCTTTGATA

Flanking Amino Acid:

MSQDSMMKLKGMAVAARSQG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

69.3

33.7

Major BPS

0.85

0.9

39.9

Major PPT

77.5

0.62

0.9

37.8

Minor 5ss

-2.2

3.4

42.5

44.5

Minor BPS

0.31

1.3

64.68

35.9

Associated Gene:

Gene:

DAB2

Ensembl Gene ID:

ENSAPLG00000009262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024385

9834898 - 9845414

10517

ENSAPLT00000009668

9834898 - 9845414

10517