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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9837072_9837202_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9837072 - 9837202

Intron Length:
131

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGAAAT

5'SS Class:
strong_major

3'SS Sequence:
TTCCTAATTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTAAT

U12 Branch Point Sequence:
TTTTTCCTAATT

Flanking Amino Acid:
GIKIIDEKTGVIEHEHPVNK

Intron Amino Acid Position:
113

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.2
0.81
0.9
80.7
33.7

Major BPS
81.9
0.79
0.9
80.1
30

Major PPT
75.1
0.56
0.9
67.1
38.2

Minor 5ss
34.7
-1.7
3
41.3
44.8

Minor BPS
74.5
0.85
1.6
92.26
30

Associated Gene:

Gene:
DAB2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9834898 - 9845414
10517

9834898 - 9845414
10517