Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9841662_9842175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9841662 - 9842175

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTAG

5'SS Class:

major

3'SS Sequence:

CTTCCCCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

GTGTAATTATCT

Flanking Amino Acid:

TSPTTAPPLAGGLPITSSPW

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

67.6

40.2

Major BPS

76.9

0.67

66.3

40.4

Major PPT

78.5

0.64

0.7

72.1

26.1

Minor 5ss

38.3

-1.3

3.1

44.5

Minor BPS

49.1

0.01

71.26

44.9

Associated Gene:

Gene:

DAB2

Ensembl Gene ID:

ENSAPLG00000009262

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024385

9834898 - 9845414

10517

ENSAPLT00000009668

9834898 - 9845414

10517