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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9842701_9843192_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9842701 - 9843192

Intron Length:
492

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCTTCTA

5'SS Class:
major

3'SS Sequence:
GTCTTCTTCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTGAT

U12 Branch Point Sequence:
ACTTGTTTGATT

Flanking Amino Acid:
ARRAEQQNLSELPKPVPRQS

Intron Amino Acid Position:
665

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72
0.52
1.1
67.1
39.9

Major BPS
78.6
0.71
1.2
71.4
45.1

Major PPT
76.3
0.59
0.8
69.2
37

Minor 5ss
31.4
-2.1
3.1
41.4
44.9

Minor BPS
56.4
0.28
1.8
72.25
39.7

Associated Gene:

Gene:
DAB2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9834898 - 9845414
10517

9834898 - 9845414
10517