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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9854873_9855538_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9854873 - 9855538

Intron Length:

666

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TCTCTTAAAACA

Flanking Amino Acid:

GPCDPCTNQRFRSRSIERFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.7

43.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

76.3

0.59

1.1

80.2

36.5

Minor 5ss

45.1

-0.5

2.9

56.3

47.9

Minor BPS

46.8

-0.2

1.9

60.68

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034857

9848178 - 9868458

20281

ENSAPLT00000009361

9848178 - 9868458

20281