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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9857176_9858909_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9857176 - 9858909

Intron Length:

1734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CTTTTTTGAAGC

Flanking Amino Acid:

VSEVGRTAGQGINVLGMQPM

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.7

35.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

84.1

0.77

0.8

78.4

Minor 5ss

-0.8

2.6

51.2

45.5

Minor BPS

53.7

0.1

1.8

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034857

9848178 - 9868458

20281

ENSAPLT00000009361

9848178 - 9868458

20281