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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9861852_9862722_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9861852 - 9862722

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TATCCTTTAATA

Flanking Amino Acid:

VLDNHAMSRLDISVEDVKKC

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

27.8

Major BPS

0.75

78.6

Major PPT

89.2

0.88

0.8

81.2

36.5

Minor 5ss

44.7

-0.6

3.2

66.4

45.1

Minor BPS

75.4

0.79

1.1

78.04

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034857

9848178 - 9868458

20281

ENSAPLT00000009361

9848178 - 9868458

20281