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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9864810_9865049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9864810 - 9865049

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTTTCTTCCACA

Flanking Amino Acid:

VDAPVVIQERPSPIHTLVPV

Intron Amino Acid Position:

469

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.4

33.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

88.2

0.86

0.6

84.1

24.1

Minor 5ss

42.4

-0.8

2.8

51.5

44.9

Minor BPS

61.7

0.36

79.34

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009361

9848178 - 9868458

20281