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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9865279_9866244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9865279 - 9866244

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTAATACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GATGTCTTAATA

Flanking Amino Acid:

CQIPKSTRVEVVTDGGWSCW

Intron Amino Acid Position:

545

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

1.1

84.4

27.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

68.2

0.41

60.3

43.9

Minor 5ss

31.4

-2.1

2.4

41.4

Minor BPS

0.5

1.4

68.7

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009361

9848178 - 9868458

20281