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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9866415_9868288_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

9866415 - 9868288

Intron Length:

1874

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TGTTCTATCACT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

78.4

0.64

0.7

76.4

25.6

Minor 5ss

39.7

-1.2

2.9

52.1

44.7

Minor BPS

57.8

0.32

81.57

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008988

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034857

9848178 - 9868458

20281

ENSAPLT00000009361

9848178 - 9868458

20281