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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9985576_9986909_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9985576 - 9986909

Intron Length:
1334

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGTGTT

5'SS Class:
strong_major

3'SS Sequence:
TGTTTTATGACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAT

U12 Branch Point Sequence:
TGTTTTATGACA

Flanking Amino Acid:
HNPDTAEGQLKEDREARFLA

Intron Amino Acid Position:
274

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.2
0.9
0.8
88.1
25.2

Major BPS
81.2
0.78
1.1
71.4
45.1

Major PPT
76.8
0.6
1
73.3
40.8

Minor 5ss
40.3
-1.1
3.4
58.5
40.4

Minor BPS
58.4
0.26
1.6
71.42
34.1

Associated Gene:

Gene:
RICTOR

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9949711 - 10021868
72158

9948343 - 10021868
73526

9948343 - 10021868
73526

9948343 - 10021973
73631