Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9986978_9988604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9986978 - 9988604

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTTTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGGTTTTAATG

Flanking Amino Acid:

GIVAAFRSWAGIISLCKPGN

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.63

0.9

70.7

40.5

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

56.1

0.05

1.4

56.25

40.5

Associated Gene:

Gene:

RICTOR

Ensembl Gene ID:

ENSAPLG00000008632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021909

9948343 - 10021973

73631

ENSAPLT00000009005

9949711 - 10021868

72158

ENSAPLT00000004108

9948343 - 10021868

73526

ENSAPLT00000033935

9948343 - 10021868

73526