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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_9991040_9991159_F


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9991040 - 9991159

Intron Length:
120

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATTAAT

5'SS Class:
strong_major

3'SS Sequence:
AACTTTTTTGAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
ATTTTTTAAACT

Flanking Amino Acid:
SAFITNGLLEGLVEVITSSD

Intron Amino Acid Position:
407

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.5
0.91
0.9
88.9
24.6

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
71
0.47
1.1
71.6
37.5

Minor 5ss
37.5
-1.4
2.8
51.2
45.3

Minor BPS
69.1
0.68
1.6
85.39
35.1

Associated Gene:

Gene:
RICTOR

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9948343 - 10021868
73526

9948343 - 10021973
73631

9949711 - 10021868
72158